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  "Title": "Risk Assessments for Ecosystems or Ecosystem Components",
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  "Description": "Implementation of a modular framework for ecosystem risk\nassessments, combining existing risk assessment approaches\ntailored to semi-quantitative and quantitative analyses.",
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  "Date/Publication": "2026-04-29 13:23:31 UTC",
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    "calc_exposure",
    "calc_sensitivity",
    "create_template_exposure",
    "create_template_sensitivity",
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    "model_sensitivity",
    "plot_diagnostic_sensitivity",
    "plot_heatmap",
    "plot_radar",
    "risk",
    "status",
    "vulnerability"
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      "title": "Expert-based exposure scores for five pressures",
      "object": "ex_expert_exposure",
      "class": [
        "data.frame"
      ],
      "fields": [
        "pressure",
        "magnitude",
        "frequency",
        "trend",
        "spatial",
        "uncertainty_magnitude",
        "uncertainty_frequency",
        "uncertainty_trend",
        "uncertainty_spatial"
      ],
      "rows": 5,
      "table": true,
      "tojson": true
    },
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      "title": "Expert-based sensitivity and adaptive capacity scores for four indicators and five pressures",
      "object": "ex_expert_sensitivity",
      "class": [
        "data.frame"
      ],
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        "pressure",
        "type",
        "sens_feeding",
        "sens_behaviour",
        "sens_reproduction",
        "sens_habitat",
        "sens_general",
        "ac_feeding",
        "ac_behaviour",
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        "uncertainty_sens_behaviour",
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        "uncertainty_sens_general",
        "uncertainty_ac_feeding",
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        "uncertainty_ac_habitat",
        "uncertainty_ac_general"
      ],
      "rows": 40,
      "table": true,
      "tojson": true
    },
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      "object": "ex_expert_status",
      "class": [
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      ],
      "fields": [
        "indicator",
        "status",
        "score"
      ],
      "rows": 4,
      "table": true,
      "tojson": true
    },
    {
      "name": "ex_output_aggregate_risk_expert",
      "title": "Example output from the 'aggregate_risk()' function based on expert scores",
      "object": "ex_output_aggregate_risk_expert",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
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      "title": "Example output from the 'aggregate_risk()' function based on modelled scores",
      "object": "ex_output_aggregate_risk_model",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "ex_output_calc_exposure",
      "title": "Example output from the 'calc_exposure()' function",
      "object": "ex_output_calc_exposure",
      "class": [
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      ],
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        "exposure",
        "uncertainty"
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      "table": true,
      "tojson": true
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      ],
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        "pressure",
        "type",
        "pathway",
        "sensitivity",
        "adaptive_capacity",
        "uncertainty_sens",
        "uncertainty_ac",
        "sens_original.sens_feeding",
        "sens_original.sens_behaviour",
        "sens_original.sens_reproduction",
        "sens_original.sens_habitat",
        "sens_original.sens_general",
        "ac_original.ac_feeding",
        "ac_original.ac_behaviour",
        "ac_original.ac_reproduction",
        "ac_original.ac_habitat",
        "ac_original.ac_general"
      ],
      "rows": 40,
      "table": true,
      "tojson": true
    },
    {
      "name": "ex_output_model_exposure",
      "title": "Example output from the 'model_exposure()' function based on time series",
      "object": "ex_output_model_exposure",
      "class": [
        "data.frame"
      ],
      "fields": [
        "pressure",
        "exposure",
        "uncertainty",
        "comp_magnitude",
        "comp_frequency",
        "comp_trend",
        "comp_direction",
        "comp_spatial",
        "uncertainty_arima",
        "uncertainty_gam",
        "mean_baseline",
        "mean_current",
        "standard_deviation_baseline",
        "slope_linear_model",
        "p_value_linear_model"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "ex_output_model_sensitivity",
      "title": "Example output from the 'model_sensitivity()' function based on time series",
      "object": "ex_output_model_sensitivity",
      "class": [
        "data.frame"
      ],
      "fields": [
        "indicator",
        "pressure",
        "type",
        "pathway",
        "sensitivity",
        "adaptive_capacity",
        "uncertainty_sens",
        "uncertainty_ac",
        "r_sq",
        "p_value",
        "edf",
        "uncertainty_gam",
        "uncertainty_arima"
      ],
      "rows": 16,
      "table": true,
      "tojson": true
    },
    {
      "name": "ex_output_risk_expert",
      "title": "Example output from the 'risk()' function based on expert scores",
      "object": "ex_output_risk_expert",
      "class": [
        "data.frame"
      ],
      "fields": [
        "indicator",
        "pressure",
        "type",
        "pathway",
        "vulnerability",
        "status",
        "risk",
        "uncertainty"
      ],
      "rows": 40,
      "table": true,
      "tojson": true
    },
    {
      "name": "ex_output_risk_model",
      "title": "Example output from the 'aggregate_risk()' function based on modelled scores",
      "object": "ex_output_risk_model",
      "class": [
        "data.frame"
      ],
      "fields": [
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        "pressure",
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      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "ex_output_status",
      "title": "Example output from the 'status()' function",
      "object": "ex_output_status",
      "class": [
        "data.frame"
      ],
      "fields": [
        "indicator",
        "status",
        "score"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "ex_output_vulnerability_expert",
      "title": "Example output from the 'vulnerability()' function based on expert scores",
      "object": "ex_output_vulnerability_expert",
      "class": [
        "data.frame"
      ],
      "fields": [
        "indicator",
        "pressure",
        "type",
        "pathway",
        "vulnerability",
        "uncertainty"
      ],
      "rows": 40,
      "table": true,
      "tojson": true
    },
    {
      "name": "ex_output_vulnerability_model",
      "title": "Example output from the 'vulnerability()' function based on modelled scores",
      "object": "ex_output_vulnerability_model",
      "class": [
        "data.frame"
      ],
      "fields": [
        "indicator",
        "pressure",
        "type",
        "pathway",
        "vulnerability",
        "uncertainty"
      ],
      "rows": 16,
      "table": true,
      "tojson": true
    },
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      "name": "indicator_ts_baltic",
      "title": "Baltic Sea indicator time series",
      "object": "indicator_ts_baltic",
      "class": [
        "data.frame"
      ],
      "fields": [
        "year",
        "zooplankton_mean_size",
        "eastern_baltic_cod"
      ],
      "rows": 33,
      "table": true,
      "tojson": true
    },
    {
      "name": "pressure_ts_baltic",
      "title": "Baltic Sea pressure time series",
      "object": "pressure_ts_baltic",
      "class": [
        "data.frame"
      ],
      "fields": [
        "year",
        "nitrogen",
        "phosphorous",
        "surf_temp_sum",
        "bot_temp_ann",
        "surf_sal_sum",
        "bot_sal_ann",
        "bot_oxy_ann",
        "fishing_cod"
      ],
      "rows": 33,
      "table": true,
      "tojson": true
    },
    {
      "name": "pressure_ts_northsea",
      "title": "North Sea pressure time series",
      "object": "pressure_ts_northsea",
      "class": [
        "data.frame"
      ],
      "fields": [
        "year",
        "bot_temp",
        "bot_sal",
        "fishing_cod"
      ],
      "rows": 51,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "aggregate_risk",
      "title": "Compute High-Complexity Multi-Risk Scores and (Eco)system Risk",
      "topics": [
        "aggregate_risk"
      ]
    },
    {
      "page": "calc_exposure",
      "title": "Calculate Overall Exposure Scores from Component-Specific Expert Ratings",
      "topics": [
        "calc_exposure"
      ]
    },
    {
      "page": "calc_sensitivity",
      "title": "Calculate Overall Sensitivity and Adaptive Capacity Scores from Trait-Specific Expert Ratings",
      "topics": [
        "calc_sensitivity"
      ]
    },
    {
      "page": "create_template_exposure",
      "title": "Create a Template for Expert-Based Exposure Scoring",
      "topics": [
        "create_template_exposure"
      ]
    },
    {
      "page": "create_template_sensitivity",
      "title": "Create a Template for Expert-Based Sensitivity and Adaptive Capacity Scoring",
      "topics": [
        "create_template_sensitivity"
      ]
    },
    {
      "page": "ex_expert_exposure",
      "title": "Expert-based exposure scores for five pressures",
      "topics": [
        "ex_expert_exposure"
      ]
    },
    {
      "page": "ex_expert_sensitivity",
      "title": "Expert-based sensitivity and adaptive capacity scores for four indicators and five pressures",
      "topics": [
        "ex_expert_sensitivity"
      ]
    },
    {
      "page": "ex_expert_status",
      "title": "Expert-based status scores for four indicators",
      "topics": [
        "ex_expert_status"
      ]
    },
    {
      "page": "ex_output_aggregate_risk_expert",
      "title": "Example output from the 'aggregate_risk()' function based on expert scores",
      "topics": [
        "ex_output_aggregate_risk_expert"
      ]
    },
    {
      "page": "ex_output_aggregate_risk_model",
      "title": "Example output from the 'aggregate_risk()' function based on modelled scores",
      "topics": [
        "ex_output_aggregate_risk_model"
      ]
    },
    {
      "page": "ex_output_calc_exposure",
      "title": "Example output from the 'calc_exposure()' function",
      "topics": [
        "ex_output_calc_exposure"
      ]
    },
    {
      "page": "ex_output_calc_sensitivity",
      "title": "Example output from the 'calc_sensitivity()' function",
      "topics": [
        "ex_output_calc_sensitivity"
      ]
    },
    {
      "page": "ex_output_model_exposure",
      "title": "Example output from the 'model_exposure()' function based on time series",
      "topics": [
        "ex_output_model_exposure"
      ]
    },
    {
      "page": "ex_output_model_sensitivity",
      "title": "Example output from the 'model_sensitivity()' function based on time series",
      "topics": [
        "ex_output_model_sensitivity"
      ]
    },
    {
      "page": "ex_output_risk_expert",
      "title": "Example output from the 'risk()' function based on expert scores",
      "topics": [
        "ex_output_risk_expert"
      ]
    },
    {
      "page": "ex_output_risk_model",
      "title": "Example output from the 'aggregate_risk()' function based on modelled scores",
      "topics": [
        "ex_output_risk_model"
      ]
    },
    {
      "page": "ex_output_status",
      "title": "Example output from the 'status()' function",
      "topics": [
        "ex_output_status"
      ]
    },
    {
      "page": "ex_output_vulnerability_expert",
      "title": "Example output from the 'vulnerability()' function based on expert scores",
      "topics": [
        "ex_output_vulnerability_expert"
      ]
    },
    {
      "page": "ex_output_vulnerability_model",
      "title": "Example output from the 'vulnerability()' function based on modelled scores",
      "topics": [
        "ex_output_vulnerability_model"
      ]
    },
    {
      "page": "indicator_ts_baltic",
      "title": "Baltic Sea indicator time series",
      "topics": [
        "indicator_ts_baltic"
      ]
    },
    {
      "page": "model_exposure",
      "title": "Model Overall Exposure Scores Using Time Series Data",
      "topics": [
        "model_exposure"
      ]
    },
    {
      "page": "model_sensitivity",
      "title": "Model Overall Sensitivity Scores Using Time Series Data",
      "topics": [
        "model_sensitivity"
      ]
    },
    {
      "page": "plot_diagnostic_sensitivity",
      "title": "Produce Diagnostic Plots for the",
      "topics": [
        "plot_diagnostic_sensitivity"
      ]
    },
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      "headings": [
        "Outline",
        "Introduction",
        "Overview risk assessments",
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        "Scoping",
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